Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866843.1_cds_XP_016432895.1_29096
CDS Infomation

[gene=LOC107759462] [db_xref=GeneID:107759462] [protein=vacuolar-processing enzyme-like] [protein_id=XP_016432895.1] [location=join(25993..26190,26802..26966,27052..27208,28644..28729,28873..29072,29311..29359,29573..29782,30430..30636,30849..31031)] [gbkey=CDS]
Sequence

ATGATTGTTCGCTACGTTGTGAGTGCTATCTTGATCATTGGACTGTCAGTTGTCGCCGCC
GTTGACGGCAGGGATGTGCTGAAATTACCATCGGAAGCATCAACGTTTTTCAGTGGTAAT
TATGATGATGATTCAATTGGTACTAAATGGGCTGTGTTGGTTGCTGGATCAAGAGGCTAC
TGGAATTACAGGCACCAGGCAGATGTTTGTCACGCATATCAGCTGTTGAAGAAAGGTGGC
CTCAAGGATGAGAATATTATTGTGTTTATGTATGATGACATTGCTCATAATTTTGAAAAT
CCTAGGCCAGGAGTCATCATAAATAGCCCTAATGGTGACGATGTCTATAAAGGAGTTCCA
AAGGATTATACAGGGCATCATGTTACAGCCAACAACTTTCTTGCTGTTATCCTTGGGAAC
AAAGCCGCTCTTAGTGGAGGCAGTGGGAAGGTGGTGGAAAGTGGTCCAAATGATCATATC
TTCATCTTCTACAGTGATCATGGTGGTCCTGGAGTGCTTGGGATGCCTAGTGGCCCTTAT
CTCTATGCTGATGATTTAATTGATGTCTTGAAAAGGAAGCATGCTTCAGGGACATACAAA
AGCTTAGTCTTTTACATTGAGGCTTGTGAATCTGGGAGTATATTTGAGGGCCTTCTACCT
GAAGGTCTTAATATCTATGCAACAACAGCATCAAATGCTGAAGAGGACAGTTGGGGAACC
TACTGTCCAGGAGACTATCCAGGTCCTCCTCCAGAATACCAGACCTGCTTGGGTGACTTG
TACGCTGTATCTTGGATGGAAGATAGTGAAAAACACAATCTCCGAAGAGAAACTTTAGGA
ATGCAATATGAGCTGGTTAAAAGGAGAACTGCTAACTCATTTCCCTATGCAAGTTCGCAT
GTCATGCAATATGGTGATCTGAAGCTAATGGATGATCCTCTTTCCCTTTATATGGGCACC
AATCCCGCAAATGATAATTACACTTTTCTGGACGAGAATTCCTCACTGCTCTCCGCAAAG
CCTGTTAACCAACGTGATGCAGATCTTTTGCATTTCTGGGACAAGTTCCTCAAGGCTCCT
CAAGGTTCTGTTAGGAAAGTTGAAGCCCAGAAGCAGCTGAGTGAAGCTATGTCACACAGA
ATGCACATAGATGACAGCATTGCTCTTGTTGGGAGGCTTCTATTCGGAATTGAGAAAGGT
CCTGACGTGCTGATTAGAGTCCGACCTACTGGCGAGCCTCTTGTTGATGATTGGAATTGT
CTTAAATCCTTTGTAAGAACATTTGAGACACGTTGTGGATCATTGTCCCAGTATGGAATG
AAACATATGCGTGCTGTTGCTAACATATGCAACTCTTGTATAACAATGGAGCAGATAGCC
AAAGCATCAGCACAAGCTTGTGTGAGTATTCCTTCCAACTCTTGGAGTTCGCTCGACGAG
GGATTTAGTGCATAG

Peptide Sequence

PEP ID

XP_016432895.1
PEP Infomation

PREDICTED: vacuolar-processing enzyme-like [Nicotiana tabacum]
Sequence

MIVRYVVSAILIIGLSVVAAVDGRDVLKLPSEASTFFSGNYDDDSIGTKWAVLVAGSRGY
WNYRHQADVCHAYQLLKKGGLKDENIIVFMYDDIAHNFENPRPGVIINSPNGDDVYKGVP
KDYTGHHVTANNFLAVILGNKAALSGGSGKVVESGPNDHIFIFYSDHGGPGVLGMPSGPY
LYADDLIDVLKRKHASGTYKSLVFYIEACESGSIFEGLLPEGLNIYATTASNAEEDSWGT
YCPGDYPGPPPEYQTCLGDLYAVSWMEDSEKHNLRRETLGMQYELVKRRTANSFPYASSH
VMQYGDLKLMDDPLSLYMGTNPANDNYTFLDENSSLLSAKPVNQRDADLLHFWDKFLKAP
QGSVRKVEAQKQLSEAMSHRMHIDDSIALVGRLLFGIEKGPDVLIRVRPTGEPLVDDWNC
LKSFVRTFETRCGSLSQYGMKHMRAVANICNSCITMEQIAKASAQACVSIPSNSWSSLDE
GFSA

Transcript Sequence

Gene sequence data has not been registered.